It seems that a lot of people are convinced that Nintendo is going to make a 3DS successor that will get Pokémon games instead of the Switch, or that Game Freak is going to make Pokémon games for mobile. While I was thinking about this, I remembered an interview from two years ago where Junichi Masuda commented on why Pokémon isn't on home consoles:
http://www.kotaku.co.uk/2015/01/27/nintendo-still-wont-make-pokemon-home-consoles
"But there are a lot of people who want a home console version, we know. Especially now with internet features that let people battle and trade. But the way that handhelds allow people to come together... if we could figure out a way to make that happen on consoles it would be an option on the future, but right now that’s just not possible. If you've ever been in the audience at the Pokémon World Championships, that's my ideal for Pokémon, all these people gathering together and playing with each other. If there were a way that a console could enable that, it might be an option, but right now, handheld it is."
From this, I think it's likely that Pokémon was one of the main factors in Nintendo deciding to design the Switch as a home console/handheld hybrid in the first place. Pokémon is the only first-party series that has never had a significant presence on Nintendo's home consoles, and it's also their second most-popular franchise. Game Freak always refused to make fully-fledged Pokémon games on Nintendo's consoles because it clashed with their design philosophy, but now Game Freak has exactly what they want: A console that lets people come together and battle/trade. I don't think it's a coincidence that Masuda was talking about this (how they'd consider a console Pokémon game if they could get people to gather and play together in-person) in January 2015, just three months before Nintendo first mentioned the NX.