I seen someone make this topic on twitter a while back and I find it pretty cool when devs take the time to do this.
My favourite is Deteoit become Human in which an AI on screen starts to react to the choices you made in the story. And ***spoilers*** you can choose to set her free depending on what choices you make and there are other outcomes to. Really cool touch.
What's your favourite? The ambience change of Geralt mediating in The Witcher 3 for example of the flag slowly lowering in spec ops the line as another...