You missed Luigi's Mansion 3 too. The first one sold 460k on GC and the second one sold 1.17M on 3DS.
Sorry, but the four named initially (Pokemon, Animal Crossing, DQ and Yokai Watch) are all usual million sellers in japan. The last two entries in Fire Emblem barely sold past 500K and the best was at 800K. Luigi's mansion falls also short of the million, except for Dark Moon on the 3DS. Both IPs are great, but much smaller than the other four.
Fire Emblem Fates is severely undertracked on Vgc. According to Nintendo, Fates had already sold 1.84 million units a few months after launching in Japan, a few weeks after launching in America, and before even coming out in Europe.
Fates most likely sold a million in Japan.