It's been years since I read the article, but I managed to find it fairly easily on Google. I was pretty elated when it popped up so fast. If you guys are interested, here it is:
http://www.zeldainformer.com/2008/05/the-message-of-majoras-mask.php#more
It's a very long read, but I'll be damned if it doesn't hold the reader's attention better than almost anything else. :P
There are more write-ups like this one in the third (bottom) section of this page:
http://www.zeldainformer.com/z6mm/index.php
There are also other things that make the game even more amazing, mainly the characters. The "sad tree" you find in the beginning, the Deku Butler mistaking you for his son, the second to last scene in the ending showing the sad tree again. Even Link can't save everyone. Is the Sad Tree the dead Deku, or was the Deku's soul torn out of him? The tree shows emotion and doesn't seem to be dead, so I think the Deku's soul (or what have you) was merely ripped out of him, and he was warped into a tree by Majora's Mask.
I love how the Skull Kid is seen as the villian, but really he's just a very lonely and sad person who's lost his friends, and he is being posessed by a freakin mask.
There are just way too many things to talk about and list here, but I don't want to go on and on. This game just has so much to it. It's also the only game I've ever broken down into tears, even after multiple playthroughs no less. The scene with the Zombie dad and his daughter, and the Song of Healing that goes along with it (along with the other similar scenes) are just too much. That Song of Healing has got to be one of the most emotional tunes I've ever, ever heard.
