So, it doesn't take place in any particular TMNT universe... I'm not sure if that means they are going to have supporting characters from all over or just Eastman and Laird's TMNT. What the heck, name some characters you would like to see in the game.
Casey Jones
Baxter Stockman
Usagi Yojimbo
Mona Lisa (yeah, yeah, I know she was only in one episode.)
I would cite regulation, but I know you will simply ignore it.