I'm gonna be really honest here. When I think Rockstar and ND (and I'll toss Bethesda's main team in there as well), they make fantastic games (for the most part), not disputing that or trying to diminish it, however, they are above all else, media darlings. As good as they are, their games all get about a 5 point meta boost on studio name alone. I love and enjoy many of their games, I recognize their greatness as developers, but at the same time they are often given passes on things that other devs get showed up on, which I find incredibly tiresome.
Do I think Kojima's studio could possibly receive the same darling treatment. Ya I do, given the love the gaming media already has for that man. Give him his own studio, with pretty much total control over what he's making, unless they make a complete mess of a game, there's a good chance it'll be the next darling studio to worship at the altar.