Just out of interest, for the major choices did you chose based on your alignment or what you truly wanted, I mean the big things like
Geth
What to do with the collector station
Samara/Morinth
And other bits and bobs. I find that I am having to mix and match, because any time Thane is involved I have to be nice, which goes against the style in my renegade playthrough, but with the real big choices, I just want to see the 2 different outcomes