http://gonintendo.com/viewstory.php?id=114401
image link is kinda huge, go there to see it, but their theory is
*Beginning of time*
Minish Cap
Four Swords
Four Swords Adventures
Ocarina of Time
*Timeline Split*
*Line A*
Majora's Mask
Twilight Princess
Zelda
Adventure of Link
A Link to the Past
Oracle of Ages
Oracle of Seasons
*Line B*
Wind Waker
Phantom Hourglass
Spirit Tracks
I mostly agree with it, except that i would put Majora's Mask in line B, to explain why Link wasn't around when Ganondorf came back, and then Link to the Past goes after Twilight Princess, then the Oracles, then Zelda I
Monster Hunter: pissing me off since 2010.