This was harder than I thought. Still not sure on some.
NES: Crystalis
SNES: Yoshi's Island
N64: Zelda Majora's Mask
Gamecube: Super Smash Brothers Melee
Wii: Super Mario Galaxy 2
Gameboy: Pokemon Red
Gameboy Advance: Fire Emblem
DS: The World Ends with You
PC: Oblivion
Genesis: Streets of Rage 2
Jaguar: Cybermorph