If you go by sales, this is the case.
Best selling JRPG in Japan on 360: Blue Dragon - 210K. Other sellers: Lost Oddysseus 100K, Eternal Sonata 79K
Ps3: Valkyria Chronicles: 125K, Disagea 3 (isn't on GR, will update this on other list) 105K
Worldwide:
X360: Lost Ody - 720K, Blue Drag - 490K, Mass Effect (I didn't count this as JRPG, but I dunno really, so I put it up) 1.91M
Ps3: Valkyria Chronicles: 125K, Disagea 3 (isn't on GR, will update this on other list) 105K
Wii: Dragon Quest Towers, 660K and Chocobo mystery, 110K
http://www.vgchartz.com/games/userreviewdisp.php?id=261
That is VGChartz LONGEST review. And it's NOT Cute Kitten DS