The only one I can think of is Metroid Prime Trilogy too. I've got the "Special Edition" with the steelbook, art book and translucent slip cover. Bought it when it came out, and will never sell it. Absolutely the best way to play the first two games.
Besides that, I have a few SNES games that go for decently high (Final Fantasy II and Link to the Past), and Twilight Princess on Gamecube is still fairly expensive.