This is tough but I'd have to vote this way:
1. Ocarina of Time (simply amazing for the time)
2. The Legend of Zelda (again, amazing for its time)
3. Twilight Princess (brilliant game, a little last gen so it gets bumped down)
4. Link to the Past (Like TP, seemed like an update to the original and wasn't that ground-breaking)
5. Majora's Mask (not nearly as good as OoT but still pretty damned good)
7.
8.
9.
10.
...
163. Adventures of Link (damn you, Nintendo!)
Or check out my new webcomic: http://selfcentent.com/