S.Peelman on 08 March 2013
Pretty much every sequel to an N64 entry of a franchise:
Super Mario 64 > Super Mario Sunshine
Zelda Majora's Mask > Zelda Wind Waker
Mario Kart 64 > Mario Kart Double Dash
Star Fox 64 > Star Fox Adventures
GoldenEye > whatever Bond game came after
Banjo Tooie > Banjo what's-it's-name
and more.
Also, on a more serious note:
Star Wars Knights of the Old Republic > Knights of the Old Republic II: The Sith Lords
