Best FFXII: For the epic story and totally immersive world, the fact the characters were somewhat normal (though they had magic balthier and fran were only pirates rather than super soldiers, half espers, crystal chosen awrriors of light etc etc) and the villainous occuria being so awesomely powerful they justified their positions as gods (they actually had god like powers, unlike gods in some other games (not just FF'S), and they were so subversive in their methods a lot of people that played didn't even realise they were the villains. Plus Balthier as a character (best character ever, anywhere IMO) and Yiazmat as an (optional) enemy boss fight immortalised this game for me.
Worst FFIX: Story was too much like a cross between crystal chronicles and shrek (they definitely targeted the younger generation) and the intense easyness of the game. phoenix was a way too powerful summon, with auto potion, auto regen, auto haste and auto life for the last 15 hours of the game it was actaully impossible to die. Plus the abundfance of gil meant you ended up with 99 of every possible item.
Still even the worst FF is a great game and mops the floor with 90% of everything else on the market IMO, even the oldies like FFI through FFIII still are more fun than a lot of the new rpg's around