Just a quick lookup I did:
Quick answer: Xbox 360 by around 140,000 units.
Here's the top list for the mixed sales of all games above 125,000 units (according to VGCharts). This list isn't including those below the 125k mark, but I did add up the sales to give the 360 leading numbers.
360 Call of Duty 2 837000
360 Madden 06 456500
Wii Rayman & Raving Rabbids 375250
360 NFS:MW 342000
Wii Red Steel 335500
PS3 Madden 07 335250
Wii Madden 07 315250
Wii Super Money Ball 267250
Wii Call of Duty 3 251250
Wii Marvel: Ultimate Alliance 207250
360 Condemned 206750
PS3 NFS: Carbon 185500
Wii Trauma Center 172000
360 Dead or Alive 4 170750
360 Quake 4 170250
PS3 FNR3 168250
PS3 Marvel: Ultimate Alliance 160000
360 NBA Live 06 157750
360 NBA 2k6 152000
360 Tiger Woods 2k6 142500
360 Gun 138250
Wii DBZ 2 134500
PS3 NBA '07 129250
Wii NFS: Carbon 128250
Total sales for ALL units (atleast those I could count), including those not in the +125k list:
Xbox 360 ~ 2,950,000 Units
Wii ~ 2,810,500 Units
PS3 ~ 1,689,750 Units
Therefore: The 360 sells the most 3rd party units. It also will continue selling including launch due to GRAW and Oblivion in March. The Wii and PS3 maintain very similar 3rd party sales attach ratios (somewhere near 1.5 or so). The 360 has about double that attach ratio for 3rd party sales (although it sold almost half the hardware as the Wii, and about the same as the PS3)
So we can deduce:
The 360 is the king (thus far) of 3rd party sales.
The Wii is doing good
The PS3 is doing good (but bad considering # of h/w units sold).
Also, its worthy to note the Wii has about 5 more 3rd party titles out at this point (give or take). The PS3 has the least 3rd party games at this point. (about 7 less than Wii, 4 less than 360)