I know most of you will automatically say 'They all suck', but there are some gems out there.

 My personal favorites are Spider Man 3 for the Wii....Ha HA AH AH Ha oh crap that was funny.

 Seriously.

1.  TMNT on NES -- that was just a great game by all standards, and really freaking hard.

2.  Golden Eye 007 on N64 -- Is there really any arguement that this is a great game.

3.   Lord of the Rings: Battle for Middle Earth on PC -- I felt this was a solid RTS game and I enjoyed it.

Well, if Star Wars games count then there's a ton right there...

Do Mario games count after the Super Mario movie? =P

The first TMNT was released in 1989, a year before the movie came out, so it's safe to say that the game was based off of the cartoon. Great game? Sorry, but I'm going to have to baulk at that, but than again, it is your fav.

My favorite 3:

3.) Super Star Wars

2.) Lord of the Rings: The Two Towers

1.) Goldeneye

I'm guessing it's games that came after the movies, not the other way around so here goes:

1. Goldeneye 007 on the N64

2. Chronicles of Riddick on PC or Xbox (360 and PS3 soon)

Can't think of a 3rd to list that was really really good.

1) Goldeneye

2) Goldeneye

3) Goldeneye

100) The Karate Kid 

From your list, did Jaws on the NES beat the Karate Kid? LOL.

1.) Ghostbusters C64 (I was 10 year-old kid in 1991)

2.) ...

3.) ...

Damn, you beat me to the 1) 2) 3) Goldeneye joke.

1) Goldeneye
2) Tie Fighter
3) I'll get back to you if I think of any others that were decent.  I could list X-Wing Alliance, but I already said Tie Fighter.

Superchunk -- you have got to be kidding about TMNT.  That had to be one of the worst games ever made.

Goldeneye is on my top 3. I don't know about the other 2.