Official numbers till 30. june:
LT:
3DS HW - 53m
Wii U HW - 10m
3DS SW - 230m
Wii U SW - 61m
LTD 3DS Software:
Pokemon XY - 13.99 million
Mario Kart 7 - 11.92 million
Pokemon ORAS - 10.27 million
Super Mario 3D Land - 10.10 million
New Super Mario Bros. 2 - 9.32 million
Animal Crossing: New Leaf - 9.17 million
Super Smash 3DS - 7.04 million
LTD WiiU Software:
Mario Kart 8 - 5.43 million - 54%
Nintendo Land - 4.88 million - 49%
New Super Mario Bros. U - 4.84 million - 48%
Super Mario 3D World - 4.3 million - 43%
Super Smash Wii U - 3.83 million - 38%
Splatoon - 1.62m - 16% for now, its rising very fast :)
http://www.nintendo.co.jp/ir/en/sales/index.html