The only games I can really think of that actually had an influence on gaming are mainly the ones you already posted.
1) Wii Sports - The best selling game of all time and was marketed as THE game to get a Wii for. (As in it sold a lot of people on the motion controls). It got Sony and Microsoft to release the Kinect and Playstation Move.
2) Call of Duty 4 Modern Warfare - Nobody can even try to deny the impact this game had and still has on modern shooters till this very day. It set a standard, it had an amazing campaign and amazing multiplayer.
3) Minecraft - I feel like we can also include Minecraft in this considering how much of a success it has become on absolutely everything. Even if it didn't start out as a console game there's no doubt that people have been influenced by Minecraft. (Which is why there are so many clones out there of it).
4) LittleBigPlanet - I don't want seem like i'm only saying this because it's one of my favorite series of all time, but I do truly think that the original LBP had ideas and creation tools that no other game had before it. It also started the "Create, Play, Share" line that Sony used in some other games such as Modnation Racers.
5) Couldn't think of anything. Maybe if I do i'll edit the post and add it in.
As amazing as games like The Last of Us are, I don't think they count because The Last of Us, while amazing, did nothing really innovating. It just had a really amazing story and characters. It didn't change anything in gaming or define/innovate anything.